STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SeMB42_g05292Uncharacterized protein. (3236 aa)    
Predicted Functional Partners:
SeMB42_g02102
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
   
 
 0.624
SeMB42_g01503
Uncharacterized protein.
    
 
 0.603
SeMB42_g04173
SAC domain-containing protein.
    
 
 0.591
SeMB42_g05699
CCHC-type domain-containing protein.
    
 
 0.584
SeMB42_g02499
CSP domain-containing protein.
    
 
 0.584
SeMB42_g02174
Uncharacterized protein.
    
 
 0.495
SeMB42_g01692
Cation-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type V subfamily.
   
 
 0.491
SeMB42_g02015
Uncharacterized protein.
   
  
 0.486
SeMB42_g06665
Autophagy-related protein.
    
 
 0.468
SeMB42_g04776
Uncharacterized protein.
    
 
 0.460
Your Current Organism:
Synchytrium endobioticum
NCBI taxonomy Id: 286115
Other names: S. endobioticum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.