STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SeMB42_g05915Uncharacterized protein. (735 aa)    
Predicted Functional Partners:
SeMB42_g01278
Uncharacterized protein.
   
 0.991
SeMB42_g06838
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.987
SeMB42_g00968
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
   
 0.977
SeMB42_g06114
Uncharacterized protein.
   
 0.973
SeMB42_g07378
V-SNARE coiled-coil homology domain-containing protein.
   
 0.950
SeMB42_g00428
Uncharacterized protein; Belongs to the synaptobrevin family.
    
 0.947
SeMB42_g01710
t-SNARE coiled-coil homology domain-containing protein.
   
 
 0.938
SeMB42_g05677
Uncharacterized protein; Belongs to the synaptobrevin family.
    
 0.934
SeMB42_g05033
t-SNARE coiled-coil homology domain-containing protein.
    
 0.922
SeMB42_g02307
V-SNARE domain-containing protein.
   
 0.920
Your Current Organism:
Synchytrium endobioticum
NCBI taxonomy Id: 286115
Other names: S. endobioticum
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