STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SeMB42_g03760Adaptin_N domain-containing protein. (1209 aa)    
Predicted Functional Partners:
SeMB42_g02568
AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.
   
 0.998
SeMB42_g03451
MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.
   
 0.997
SeMB42_g02810
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
    
 0.995
SeMB42_g06678
DH domain-containing protein.
    
 0.982
SeMB42_g03195
DH domain-containing protein.
    
 0.982
SeMB42_g07730
MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.
   
 0.960
SeMB42_g00474
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
   
 0.959
SeMB42_g00407
MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.
   
 0.941
SeMB42_g04150
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
    
 0.937
SeMB42_g02916
AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.
   
0.925
Your Current Organism:
Synchytrium endobioticum
NCBI taxonomy Id: 286115
Other names: S. endobioticum
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