STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SeMB42_g04897Uncharacterized protein. (342 aa)    
Predicted Functional Partners:
SeMB42_g02516
Hydrolase_4 domain-containing protein.
    
 0.805
SeMB42_g04288
Abhydro_lipase domain-containing protein.
  
 
 0.803
SeMB42_g06285
AMP-binding domain-containing protein.
    
 0.783
SeMB42_g00232
acidPPc domain-containing protein.
    
 0.746
SeMB42_g04834
Uncharacterized protein.
   
   0.657
SeMB42_g01568
Uncharacterized protein; Belongs to the universal ribosomal protein uL13 family.
   
   0.654
SeMB42_g00658
Uncharacterized protein.
  
   0.653
PSD1
Phosphatidylserine decarboxylase proenzyme 1, mitochondrial; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). Plays a central role in phospholipid metabolism and in the interorganelle trafficking of phosphatidylserine. Belongs to the phosphatidylserine decarboxylase family. PSD-B subfamily. Eukaryotic type I sub-subfamily.
   
 0.652
SeMB42_g00043
Uncharacterized protein.
   
   0.649
SeMB42_g06171
L51_S25_CI-B8 domain-containing protein.
    
   0.648
Your Current Organism:
Synchytrium endobioticum
NCBI taxonomy Id: 286115
Other names: S. endobioticum
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