Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SeMB42_g00123 | SeMB42_g01497 | A0A507DTV4 | A0A507DM61 | Uncharacterized protein. | SPX domain-containing protein. | 0.432 |
SeMB42_g00123 | SeMB42_g01766 | A0A507DTV4 | A0A507DM11 | Uncharacterized protein. | NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. | 0.999 |
SeMB42_g00123 | SeMB42_g03415 | A0A507DTV4 | A0A507CVE9 | Uncharacterized protein. | Abhydrolase_3 domain-containing protein. | 0.813 |
SeMB42_g00123 | SeMB42_g03963 | A0A507DTV4 | A0A507DKW3 | Uncharacterized protein. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.997 |
SeMB42_g00123 | SeMB42_g05328 | A0A507DTV4 | A0A507CS31 | Uncharacterized protein. | NAD(P)-bd_dom domain-containing protein. | 0.999 |
SeMB42_g00123 | SeMB42_g05959 | A0A507DTV4 | A0A507CMZ9 | Uncharacterized protein. | GP-PDE domain-containing protein. | 0.401 |
SeMB42_g00123 | SeMB42_g06138 | A0A507DTV4 | A0A507CM70 | Uncharacterized protein. | Uncharacterized protein; Belongs to the complex I 75 kDa subunit family. | 0.999 |
SeMB42_g00123 | SeMB42_g07208 | A0A507DTV4 | A0A507DDN1 | Uncharacterized protein. | Uncharacterized protein. | 0.999 |
SeMB42_g00123 | SeMB42_g07394 | A0A507DTV4 | A0A507CG68 | Uncharacterized protein. | Uncharacterized protein; Belongs to the complex I LYR family. | 0.999 |
SeMB42_g00123 | SeMB42_g07781 | A0A507DTV4 | A0A507CF89 | Uncharacterized protein. | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. | 0.999 |
SeMB42_g01497 | SeMB42_g00123 | A0A507DM61 | A0A507DTV4 | SPX domain-containing protein. | Uncharacterized protein. | 0.432 |
SeMB42_g01497 | SeMB42_g01766 | A0A507DM61 | A0A507DM11 | SPX domain-containing protein. | NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. | 0.431 |
SeMB42_g01497 | SeMB42_g03415 | A0A507DM61 | A0A507CVE9 | SPX domain-containing protein. | Abhydrolase_3 domain-containing protein. | 0.720 |
SeMB42_g01497 | SeMB42_g03963 | A0A507DM61 | A0A507DKW3 | SPX domain-containing protein. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.705 |
SeMB42_g01497 | SeMB42_g05959 | A0A507DM61 | A0A507CMZ9 | SPX domain-containing protein. | GP-PDE domain-containing protein. | 0.954 |
SeMB42_g01497 | SeMB42_g06138 | A0A507DM61 | A0A507CM70 | SPX domain-containing protein. | Uncharacterized protein; Belongs to the complex I 75 kDa subunit family. | 0.410 |
SeMB42_g01497 | SeMB42_g07208 | A0A507DM61 | A0A507DDN1 | SPX domain-containing protein. | Uncharacterized protein. | 0.433 |
SeMB42_g01497 | SeMB42_g07394 | A0A507DM61 | A0A507CG68 | SPX domain-containing protein. | Uncharacterized protein; Belongs to the complex I LYR family. | 0.406 |
SeMB42_g01497 | SeMB42_g07781 | A0A507DM61 | A0A507CF89 | SPX domain-containing protein. | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. | 0.418 |
SeMB42_g01766 | SeMB42_g00123 | A0A507DM11 | A0A507DTV4 | NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. | Uncharacterized protein. | 0.999 |
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