STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SeMB42_g04718Uncharacterized protein. (523 aa)    
Predicted Functional Partners:
SeMB42_g07041
Tr-type G domain-containing protein.
    
 
 0.946
SeMB42_g05272
eIF2B_5 domain-containing protein.
    
 
 0.898
SeMB42_g00885
MPN domain-containing protein.
   
    0.506
SeMB42_g07340
S1 motif domain-containing protein.
   
 
 0.505
SeMB42_g06495
Uncharacterized protein.
   
 
 0.476
SeMB42_g03523
FHA domain-containing protein.
   
 
 0.476
SeMB42_g05766
Uncharacterized protein.
   
    0.471
SeMB42_g01934
Uncharacterized protein.
   
 
 0.461
SeMB42_g04107
Uncharacterized protein.
 
 
   0.432
SeMB42_g07861
Uncharacterized protein.
   
 
 0.414
Your Current Organism:
Synchytrium endobioticum
NCBI taxonomy Id: 286115
Other names: S. endobioticum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.