SeMB42_g05518 protein (Synchytrium endobioticum)

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SeMB42_g05518

Uncharacterized protein. (1077 aa)

Predicted Functional Partners:

SeMB42_g01297

0.995

SeMB42_g05765

0.986

SeMB42_g02230

0.984

SeMB42_g04519

0.982

SeMB42_g03196

0.978

SeMB42_g03456

0.970

SeMB42_g00277

0.967

SeMB42_g01544

0.955

SeMB42_g03469

0.949

LSM1

0.917

Your Current Organism:

Synchytrium endobioticum

NCBI taxonomy Id: 286115
Other names: S. endobioticum

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LSM1	SeMB42_g01297	A0A507DP60	A0A507DLT7	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	WD_REPEATS_REGION domain-containing protein.	0.614
LSM1	SeMB42_g01544	A0A507DP60	A0A507DL68	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of cytoplasmic mRNAs that have been deadenylated and subsequently uridylated at their 3'.	0.553
LSM1	SeMB42_g05518	A0A507DP60	A0A507CWC8	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	Uncharacterized protein.	0.917
SeMB42_g00277	SeMB42_g01297	A0A507DT84	A0A507DLT7	RNase_PH domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.813
SeMB42_g00277	SeMB42_g01544	A0A507DT84	A0A507DL68	RNase_PH domain-containing protein.	DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of cytoplasmic mRNAs that have been deadenylated and subsequently uridylated at their 3'.	0.988
SeMB42_g00277	SeMB42_g02230	A0A507DT84	A0A507DFX4	RNase_PH domain-containing protein.	Uncharacterized protein.	0.998
SeMB42_g00277	SeMB42_g03196	A0A507DT84	A0A507D8V4	RNase_PH domain-containing protein.	RNase_PH domain-containing protein.	0.998
SeMB42_g00277	SeMB42_g03456	A0A507DT84	A0A507D8J0	RNase_PH domain-containing protein.	S1 motif domain-containing protein.	0.998
SeMB42_g00277	SeMB42_g03469	A0A507DT84	A0A507D852	RNase_PH domain-containing protein.	Uncharacterized protein.	0.999
SeMB42_g00277	SeMB42_g04519	A0A507DT84	A0A507CXN8	RNase_PH domain-containing protein.	Tr-type G domain-containing protein.	0.984
SeMB42_g00277	SeMB42_g05518	A0A507DT84	A0A507CWC8	RNase_PH domain-containing protein.	Uncharacterized protein.	0.967
SeMB42_g00277	SeMB42_g05765	A0A507DT84	A0A507CPH3	RNase_PH domain-containing protein.	Uncharacterized protein.	0.998
SeMB42_g01297	LSM1	A0A507DLT7	A0A507DP60	WD_REPEATS_REGION domain-containing protein.	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	0.614
SeMB42_g01297	SeMB42_g00277	A0A507DLT7	A0A507DT84	WD_REPEATS_REGION domain-containing protein.	RNase_PH domain-containing protein.	0.813
SeMB42_g01297	SeMB42_g01544	A0A507DLT7	A0A507DL68	WD_REPEATS_REGION domain-containing protein.	DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of cytoplasmic mRNAs that have been deadenylated and subsequently uridylated at their 3'.	0.848
SeMB42_g01297	SeMB42_g02230	A0A507DLT7	A0A507DFX4	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.848
SeMB42_g01297	SeMB42_g03196	A0A507DLT7	A0A507D8V4	WD_REPEATS_REGION domain-containing protein.	RNase_PH domain-containing protein.	0.718
SeMB42_g01297	SeMB42_g03456	A0A507DLT7	A0A507D8J0	WD_REPEATS_REGION domain-containing protein.	S1 motif domain-containing protein.	0.871
SeMB42_g01297	SeMB42_g03469	A0A507DLT7	A0A507D852	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.720
SeMB42_g01297	SeMB42_g04519	A0A507DLT7	A0A507CXN8	WD_REPEATS_REGION domain-containing protein.	Tr-type G domain-containing protein.	0.966