Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SeMB42_g04359Uncharacterized protein. (363 aa)    
Predicted Functional Partners:
SeMB42_g03367
Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.
    
 0.781
SeMB42_g05037
Adenylate kinase.
    
 0.673
SeMB42_g05817
Uncharacterized protein.
   
 0.671
SeMB42_g06323
Chromo domain-containing protein.
    
 0.668
GUK1-2
Guanylate kinase.
    
 0.630
SeMB42_g04468
L-lactate dehydrogenase.
    
 0.623
SeMB42_g00609
Uncharacterized protein.
   
 
 0.614
SeMB42_g05577
Uncharacterized protein.
    
 0.612
SeMB42_g00241
Uncharacterized protein.
    
 0.612
SeMB42_g01174
HIT-type domain-containing protein.
    
 
 0.607
Your Current Organism:
Synchytrium endobioticum
NCBI taxonomy Id: 286115
Other names: S. endobioticum
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