STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SeMB42_g04722Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (281 aa)    
Predicted Functional Partners:
SeMB42_g05706
Carrier domain-containing protein.
 
 0.947
SeMB42_g04655
Fe-ADH domain-containing protein.
 
 0.836
SeMB42_g03403
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.817
SeMB42_g04020
Uncharacterized protein.
 
0.808
SeMB42_g00729
Uncharacterized protein.
     
 0.802
SeMB42_g03367
Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.
   
 0.783
SeMB42_g00860
4-nitrophenylphosphatase.
    
 0.766
GCV2
Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.
   
 0.764
SeMB42_g05971
Uncharacterized protein.
    
 
 0.756
SeMB42_g02351
2Fe-2S ferredoxin-type domain-containing protein.
  
 0.720
Your Current Organism:
Synchytrium endobioticum
NCBI taxonomy Id: 286115
Other names: S. endobioticum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.