STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SeMB42_g04353Uncharacterized protein. (353 aa)    
Predicted Functional Partners:
SeMB42_g01999
WD_REPEATS_REGION domain-containing protein.
   
 0.846
SeMB42_g03019
RGS domain-containing protein.
   
 0.735
SeMB42_g03788
RGS domain-containing protein.
   
 0.725
SeMB42_g01709
RGS domain-containing protein.
   
 0.725
SeMB42_g00567
Uncharacterized protein.
   
 0.723
SeMB42_g02268
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
   
 0.688
SeMB42_g02270
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
   
 0.688
SeMB42_g00842
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
   
 0.688
SeMB42_g00995
Uncharacterized protein.
    
 0.680
SeMB42_g01027
Ubiquitin carboxyl-terminal hydrolase.
    
 0.679
Your Current Organism:
Synchytrium endobioticum
NCBI taxonomy Id: 286115
Other names: S. endobioticum
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