STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SeMB42_g01700Uncharacterized protein. (611 aa)    
Predicted Functional Partners:
SeMB42_g01142
Uncharacterized protein.
   
   0.903
SeMB42_g03963
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
    
  0.795
SeMB42_g07394
Uncharacterized protein; Belongs to the complex I LYR family.
   
   0.778
SeMB42_g00677
zf-CHCC domain-containing protein.
   
   0.774
SeMB42_g06426
L51_S25_CI-B8 domain-containing protein.
   
   0.768
SeMB42_g07781
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
   
   0.767
SeMB42_g04457
Uncharacterized protein; Belongs to the complex I LYR family.
    
   0.755
SeMB42_g02140
Uncharacterized protein.
    
   0.750
SeMB42_g05328
NAD(P)-bd_dom domain-containing protein.
   
   0.749
SeMB42_g06138
Uncharacterized protein; Belongs to the complex I 75 kDa subunit family.
    
   0.747
Your Current Organism:
Synchytrium endobioticum
NCBI taxonomy Id: 286115
Other names: S. endobioticum
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