STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SeMB42_g05133Ipi1_N domain-containing protein. (702 aa)    
Predicted Functional Partners:
SeMB42_g01765
WD_REPEATS_REGION domain-containing protein.
   
 0.999
SeMB42_g07617
Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily.
   
 0.982
SeMB42_g02489
CLP1_P domain-containing protein.
   
 0.950
SeMB42_g04285
CP-type G domain-containing protein.
   
 0.946
SeMB42_g04623
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
   
 
 0.937
SeMB42_g03851
C2H2-type domain-containing protein.
   
 
 0.932
SeMB42_g03988
Peptidase_M24 domain-containing protein.
   
 
 0.924
SeMB42_g01473
Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family.
   
   0.918
SeMB42_g02317
Midasin; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits; Belongs to the midasin family.
    
 
 0.912
SeMB42_g01974
Uncharacterized protein.
   
 0.909
Your Current Organism:
Synchytrium endobioticum
NCBI taxonomy Id: 286115
Other names: S. endobioticum
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.