STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SeMB42_g03710Uncharacterized protein. (286 aa)    
Predicted Functional Partners:
SeMB42_g01572
Uncharacterized protein.
   
 0.984
SeMB42_g03536
Bms1-type G domain-containing protein.
   
 0.980
SeMB42_g05932
Uncharacterized protein.
   
 0.979
SeMB42_g07985
KH_8 domain-containing protein.
   
 0.977
SeMB42_g04660
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
    
 0.975
SeMB42_g06431
Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.
    
 0.965
SeMB42_g06719
Uncharacterized protein; Belongs to the universal ribosomal protein uS11 family.
   
  0.964
SeMB42_g04091
Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family.
   
  0.964
SeMB42_g02533
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
    
  0.964
SeMB42_g01412
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
    
 0.964
Your Current Organism:
Synchytrium endobioticum
NCBI taxonomy Id: 286115
Other names: S. endobioticum
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