STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SeMB42_g03663Uncharacterized protein. (684 aa)    
Predicted Functional Partners:
SeMB42_g01705
Brix domain-containing protein.
   
 
 0.945
SeMB42_g00938
Uncharacterized protein.
   
 
 0.930
SeMB42_g00811
Uncharacterized protein.
   
 
 0.928
SeMB42_g02428
Brix domain-containing protein.
   
 
 0.926
SeMB42_g06206
WD_REPEATS_REGION domain-containing protein.
   
  
 0.922
SeMB42_g04623
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
   
 
 0.922
CIA1
Probable cytosolic iron-sulfur protein assembly protein 1; Essential component of the cytosolic iron-sulfur (Fe/S) protein assembly machinery. Required for the maturation of extramitochondrial Fe/S proteins.
   
 
 0.912
SeMB42_g06204
Uncharacterized protein.
   
 
 0.909
SeMB42_g01549
WD_REPEATS_REGION domain-containing protein.
   
  
 0.909
SeMB42_g06859
Uncharacterized protein.
   
 
 0.904
Your Current Organism:
Synchytrium endobioticum
NCBI taxonomy Id: 286115
Other names: S. endobioticum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.