STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SeMB42_g03049Uncharacterized protein. (566 aa)    
Predicted Functional Partners:
SeMB42_g06138
Uncharacterized protein; Belongs to the complex I 75 kDa subunit family.
 
      0.852
LIP5
Lipoyl synthase, mitochondrial; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.
    
  0.570
SeMB42_g04435
Glutaredoxin domain-containing protein.
   
    0.476
SeMB42_g07041
Tr-type G domain-containing protein.
   
  
 0.474
KGD1
Oxoglutarate dehydrogenase (Succinyl-transferring).
      
 0.463
SeMB42_g03982
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
  
  
 0.439
Your Current Organism:
Synchytrium endobioticum
NCBI taxonomy Id: 286115
Other names: S. endobioticum
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