STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SeMB42_g03133Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family. (336 aa)    
Predicted Functional Partners:
SeMB42_g02782
Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.
  
 0.999
SeMB42_g05672
Uncharacterized protein.
   
 0.994
ERG9
Squalene synthase.
  
 0.993
SeMB42_g00729
Uncharacterized protein.
   
 0.989
SeMB42_g02371
SAM_MT_ERG6_SMT domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Erg6/SMT family.
   
 0.982
SeMB42_g00632
3Beta_HSD domain-containing protein.
  
 0.978
SeMB42_g07123
Uncharacterized protein.
   
 
 0.969
SeMB42_g03878
Uncharacterized protein.
   
 0.965
SeMB42_g05887
Uncharacterized protein; Belongs to the cytochrome P450 family.
   
 0.935
SeMB42_g00402
Flavodoxin-like domain-containing protein.
   
 0.922
Your Current Organism:
Synchytrium endobioticum
NCBI taxonomy Id: 286115
Other names: S. endobioticum
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