Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SPB1 | SeMB42_g00245 | A0A507CKP2 | A0A507DUE4 | AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. | Uncharacterized protein. | 0.993 |
SPB1 | SeMB42_g00979 | A0A507CKP2 | A0A507D1E6 | AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. | RNA helicase. | 0.992 |
SPB1 | SeMB42_g01245 | A0A507CKP2 | A0A507DHB5 | AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. | Uncharacterized protein. | 0.950 |
SPB1 | SeMB42_g01705 | A0A507CKP2 | A0A507DK65 | AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. | Brix domain-containing protein. | 0.976 |
SPB1 | SeMB42_g02812 | A0A507CKP2 | A0A507DBB4 | AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. | Uncharacterized protein. | 0.903 |
SPB1 | SeMB42_g02926 | A0A507CKP2 | A0A507D424 | AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. | Uncharacterized protein; Belongs to the DEAD box helicase family. | 0.935 |
SPB1 | SeMB42_g03900 | A0A507CKP2 | A0A507D9F0 | AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. | tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRM61; Catalytic subunit of tRNA (adenine-N(1)-)-methyltransferase, which catalyzes the formation of N(1)-methyladenine at position 58 (m1A58) in initiator methionyl-tRNA. | 0.839 |
SPB1 | SeMB42_g05799 | A0A507CKP2 | A0A507D4W2 | AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. | Uncharacterized protein. | 0.902 |
SPB1 | YTM1 | A0A507CKP2 | A0A507CWY1 | AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. | Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome; Belongs to the eukaryotic initiation factor 4E family. | 0.990 |
SeMB42_g00245 | SPB1 | A0A507DUE4 | A0A507CKP2 | Uncharacterized protein. | AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. | 0.993 |
SeMB42_g00245 | SeMB42_g00979 | A0A507DUE4 | A0A507D1E6 | Uncharacterized protein. | RNA helicase. | 0.990 |
SeMB42_g00245 | SeMB42_g01245 | A0A507DUE4 | A0A507DHB5 | Uncharacterized protein. | Uncharacterized protein. | 0.957 |
SeMB42_g00245 | SeMB42_g01705 | A0A507DUE4 | A0A507DK65 | Uncharacterized protein. | Brix domain-containing protein. | 0.973 |
SeMB42_g00245 | SeMB42_g02812 | A0A507DUE4 | A0A507DBB4 | Uncharacterized protein. | Uncharacterized protein. | 0.781 |
SeMB42_g00245 | SeMB42_g02926 | A0A507DUE4 | A0A507D424 | Uncharacterized protein. | Uncharacterized protein; Belongs to the DEAD box helicase family. | 0.922 |
SeMB42_g00245 | SeMB42_g03900 | A0A507DUE4 | A0A507D9F0 | Uncharacterized protein. | tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRM61; Catalytic subunit of tRNA (adenine-N(1)-)-methyltransferase, which catalyzes the formation of N(1)-methyladenine at position 58 (m1A58) in initiator methionyl-tRNA. | 0.513 |
SeMB42_g00245 | SeMB42_g05799 | A0A507DUE4 | A0A507D4W2 | Uncharacterized protein. | Uncharacterized protein. | 0.890 |
SeMB42_g00245 | SeMB42_g06807 | A0A507DUE4 | A0A507CFG1 | Uncharacterized protein. | FtsJ domain-containing protein. | 0.869 |
SeMB42_g00245 | YTM1 | A0A507DUE4 | A0A507CWY1 | Uncharacterized protein. | Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome; Belongs to the eukaryotic initiation factor 4E family. | 0.993 |
SeMB42_g00979 | SPB1 | A0A507D1E6 | A0A507CKP2 | RNA helicase. | AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. | 0.992 |
page 1 of 6