STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SeMB42_g02835Uncharacterized protein. (152 aa)    
Predicted Functional Partners:
SeMB42_g01487
Ubiquitin-like domain-containing protein.
    
 0.984
GUK1-2
Guanylate kinase.
  
 0.969
SeMB42_g02736
Uncharacterized protein.
    
 0.955
SeMB42_g05406
Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
   
 0.927
SeMB42_g01497
SPX domain-containing protein.
  
 0.919
SeMB42_g01221
Serine/threonine-protein phosphatase.
   
 0.918
SeMB42_g05962
BRO1 domain-containing protein.
   
 0.917
SeMB42_g01838
Skp1_POZ domain-containing protein; Belongs to the SKP1 family.
    
 0.916
SeMB42_g06355
Uncharacterized protein.
    
 0.915
SeMB42_g02659
Uncharacterized protein.
    
 0.915
Your Current Organism:
Synchytrium endobioticum
NCBI taxonomy Id: 286115
Other names: S. endobioticum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.