STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SeMB42_g02464Uncharacterized protein. (862 aa)    
Predicted Functional Partners:
SeMB42_g06292
Uncharacterized protein.
    
 0.986
SeMB42_g05241
RRM domain-containing protein.
    
 0.869
SeMB42_g05495
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 0.860
SeMB42_g04594
Uncharacterized protein.
   
 0.854
SeMB42_g04595
Smg4_UPF3 domain-containing protein.
   
 0.854
SeMB42_g05303
DUF2439 domain-containing protein.
    
 0.847
SeMB42_g05053
Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme.
   
 
 0.838
SeMB42_g06427
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
    
 0.837
SeMB42_g03961
Nuclear cap-binding protein subunit 2.
   
 0.806
SeMB42_g00930
Uncharacterized protein.
   
 0.797
Your Current Organism:
Synchytrium endobioticum
NCBI taxonomy Id: 286115
Other names: S. endobioticum
Server load: low (30%) [HD]