STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SeMB42_g02275Ammonium transporter. (438 aa)    
Predicted Functional Partners:
SeMB42_g01497
SPX domain-containing protein.
  
 
 0.659
PSD1
Phosphatidylserine decarboxylase proenzyme 1, mitochondrial; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). Plays a central role in phospholipid metabolism and in the interorganelle trafficking of phosphatidylserine. Belongs to the phosphatidylserine decarboxylase family. PSD-B subfamily. Eukaryotic type I sub-subfamily.
    
 0.643
SeMB42_g05959
GP-PDE domain-containing protein.
  
 
 0.632
GLN1
Glutamine synthetase; Belongs to the glutamine synthetase family.
  
  
 0.631
PIS1
CDP-diacylglycerol--inositol 3-phosphatidyltransferase.
  
 
 0.610
SeMB42_g02169
N-acetyltransferase domain-containing protein; In the N-terminal section; belongs to the acetylglutamate kinase family.
     
 0.587
SeMB42_g02625
Citrate synthase; Belongs to the citrate synthase family.
  
  
 0.581
SeMB42_g02813
NADPH:adrenodoxin oxidoreductase, mitochondrial.
  
  
 0.571
GDH2
NAD-specific glutamate dehydrogenase; NAD(+)-dependent glutamate dehydrogenase which degrades glutamate to ammonia and alpha-ketoglutarate. Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
  
 0.567
GLN1-2
Glutamine synthetase; Belongs to the glutamine synthetase family.
  
  
 0.553
Your Current Organism:
Synchytrium endobioticum
NCBI taxonomy Id: 286115
Other names: S. endobioticum
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