STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SeMB42_g02326Uncharacterized protein. (239 aa)    
Predicted Functional Partners:
SeMB42_g04660
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
  
 0.996
SeMB42_g04532
Uncharacterized protein.
  
 0.996
SeMB42_g06431
Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.
  
 0.996
SeMB42_g02086
KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family.
  
 0.996
SeMB42_g00973
Ribosomal_S17_N domain-containing protein; Belongs to the universal ribosomal protein uS17 family.
  
 0.996
SeMB42_g07194
Uncharacterized protein.
  
 0.995
SeMB42_g06432
S1-like domain-containing protein; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.
  
 0.995
RPS1
40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 0.995
SeMB42_g06719
Uncharacterized protein; Belongs to the universal ribosomal protein uS11 family.
  
 0.995
SeMB42_g02872
Uncharacterized protein.
   
 0.995
Your Current Organism:
Synchytrium endobioticum
NCBI taxonomy Id: 286115
Other names: S. endobioticum
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.