STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SeMB42_g01462NFACT-R_1 domain-containing protein. (216 aa)    
Predicted Functional Partners:
SeMB42_g01461
Uncharacterized protein.
 
 
    0.541
SeMB42_g07896
Uncharacterized protein; Belongs to the histone H2B family.
    
   0.512
SeMB42_g00334
Histone H2B; Belongs to the histone H2B family.
    
   0.512
SeMB42_g03644
TFIIS N-terminal domain-containing protein.
      
 0.451
SeMB42_g01734
PITH domain-containing protein.
 
      0.448
SeMB42_g00321
Histone H2A; Belongs to the histone H2A family.
   
   0.422
SeMB42_g00333
Histone H2A; Belongs to the histone H2A family.
   
   0.422
SeMB42_g00787
Tubulin-specific chaperone A; Belongs to the TBCA family.
   
    0.410
Your Current Organism:
Synchytrium endobioticum
NCBI taxonomy Id: 286115
Other names: S. endobioticum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.