STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SeMB42_g01035Uncharacterized protein. (167 aa)    
Predicted Functional Partners:
SeMB42_g06138
Uncharacterized protein; Belongs to the complex I 75 kDa subunit family.
    
 0.960
SeMB42_g02145
Uncharacterized protein.
    
 0.960
SeMB42_g04105
Oxidored_q6 domain-containing protein; Belongs to the complex I 20 kDa subunit family.
    
 0.956
SeMB42_g00123
Uncharacterized protein.
   
 0.953
SeMB42_g07208
Uncharacterized protein.
   
 0.952
SeMB42_g04457
Uncharacterized protein; Belongs to the complex I LYR family.
   
 0.941
SeMB42_g04237
Uncharacterized protein.
    
 0.935
SeMB42_g01766
NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.
    
 0.914
SeMB42_g05644
Complex1_49kDa domain-containing protein; Belongs to the complex I 49 kDa subunit family.
    
 0.913
SeMB42_g07394
Uncharacterized protein; Belongs to the complex I LYR family.
   
 0.912
Your Current Organism:
Synchytrium endobioticum
NCBI taxonomy Id: 286115
Other names: S. endobioticum
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