STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCV2Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine. (935 aa)    
Predicted Functional Partners:
GCV1
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family.
 
 0.999
SeMB42_g00121
Glycine cleavage system H protein; The H protein shuttles the methylamine group of glycine from the P protein to the T protein; Belongs to the GcvH family.
  
 0.998
SeMB42_g04713
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
 
 
 0.941
SeMB42_g07275
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
 
 
 0.940
SeMB42_g04425
Uncharacterized protein.
  
 
 0.925
SeMB42_g02007
ATP-grasp domain-containing protein.
  
  
 0.901
SeMB42_g01313
Dihydrolipoyl dehydrogenase.
  
 
 0.884
SeMB42_g06488
Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.
    
 0.875
SeMB42_g02590
Uncharacterized protein.
  
 
 0.864
SeMB42_g00465
Aminotran_5 domain-containing protein.
  
 
 0.859
Your Current Organism:
Synchytrium endobioticum
NCBI taxonomy Id: 286115
Other names: S. endobioticum
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