STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SeMB42_g00382Macro domain-containing protein. (264 aa)    
Predicted Functional Partners:
SeMB42_g02523
Pyr_redox_2 domain-containing protein.
  
 0.799
SeMB42_g03711
Pyr_redox_2 domain-containing protein.
  
 0.650
SeMB42_g03713
Uncharacterized protein.
  
 0.650
SeMB42_g07219
Pyr_redox_2 domain-containing protein.
  
 0.648
SeMB42_g01200
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
  0.643
SeMB42_g03719
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
  0.643
SeMB42_g00223
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
  0.643
SeMB42_g05520
DUF4201 domain-containing protein.
   
  0.635
SeMB42_g04392
Uncharacterized protein.
   
  0.635
SeMB42_g04117
Hist_deacetyl domain-containing protein.
   
  0.635
Your Current Organism:
Synchytrium endobioticum
NCBI taxonomy Id: 286115
Other names: S. endobioticum
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