STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OCQ54502.1Phage Tail Protein X. (80 aa)    
Predicted Functional Partners:
OCQ54489.1
Phage P2 GpU.
 
 
 0.995
OCQ54499.1
Baseplate J-like protein.
 
 
 0.988
OCQ54498.1
Phage tail protein P2_I.
 
 
 0.987
OCQ54500.1
Gene 25-like lysozyme.
 
 
 0.986
OCQ54492.1
Phage tail tube protein FII.
 
   0.985
OCQ54493.1
Phage tail sheath protein.
 
   0.985
OCQ54024.1
Phage late control gene D protein (GPD).
  
  
 0.968
OCQ52980.1
Phage late control gene D protein (GPD).
  
  
 0.968
OCQ54488.1
Phage late control gene D protein (GPD).
 
  
 0.966
OCQ54501.1
Phage-related baseplate assembly protein.
 
  
 0.965
Your Current Organism:
Photorhabdus australis
NCBI taxonomy Id: 286156
Other names: ACM 5210, CIP 108025, DSM 17609, P. australis, Photorhabdus asymbiotica subsp. australis, Photorhabdus asymbiotica subsp. australis Akhurst et al. 2004, strain 9802892
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