STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OCQ53567.1Hypothetical protein. (160 aa)    
Predicted Functional Partners:
OCQ53566.1
Hypothetical protein.
  
    0.828
OCQ53564.1
Hypothetical protein.
  
    0.806
OCQ53565.1
Hypothetical protein.
       0.800
OCQ53568.1
Hypothetical protein.
       0.788
OCQ53569.1
P22 coat protein - gene protein 5.
       0.670
OCQ53570.1
Hypothetical protein.
       0.657
OCQ53563.1
Phage tail protein.
       0.642
OCQ53562.1
Hypothetical protein.
       0.497
OCQ53571.1
Hypothetical protein.
       0.476
OCQ53573.1
Terminase-like family protein.
       0.476
Your Current Organism:
Photorhabdus australis
NCBI taxonomy Id: 286156
Other names: ACM 5210, CIP 108025, DSM 17609, P. australis, Photorhabdus asymbiotica subsp. australis, Photorhabdus asymbiotica subsp. australis Akhurst et al. 2004, strain 9802892
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.