STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OCQ53608.1Hypothetical protein. (68 aa)    
Predicted Functional Partners:
OCQ53609.1
Hypothetical protein.
       0.718
OCQ53603.1
Hypothetical protein.
       0.661
OCQ53604.1
Hypothetical protein.
       0.661
OCQ53605.1
Hypothetical protein.
       0.661
OCQ53606.1
Hypothetical protein.
       0.661
ssb_1
Single-stranded DNA-binding protein.
       0.661
OCQ53610.1
Hypothetical protein.
       0.517
OCQ53611.1
Hypothetical protein.
       0.481
OCQ53612.1
Hypothetical protein.
       0.481
OCQ53613.1
Hypothetical protein.
       0.413
Your Current Organism:
Photorhabdus australis
NCBI taxonomy Id: 286156
Other names: ACM 5210, CIP 108025, DSM 17609, P. australis, Photorhabdus asymbiotica subsp. australis, Photorhabdus asymbiotica subsp. australis Akhurst et al. 2004, strain 9802892
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.