node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OCQ51368.1 | dsrF | Ppb6_03440 | Ppb6_01415 | Hypothetical protein. | Intracellular sulfur oxidation protein DsrF; Part of a sulfur-relay system required for 2-thiolation of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. | 0.445 |
OCQ51368.1 | sprT | Ppb6_03440 | Ppb6_01540 | Hypothetical protein. | Hypothetical protein; Belongs to the SprT family. | 0.497 |
OCQ53396.1 | dsrF | Ppb6_01413 | Ppb6_01415 | YheO-like PAS domain protein. | Intracellular sulfur oxidation protein DsrF; Part of a sulfur-relay system required for 2-thiolation of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. | 0.825 |
OCQ53396.1 | fkpA | Ppb6_01413 | Ppb6_01412 | YheO-like PAS domain protein. | FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor. | 0.420 |
OCQ53396.1 | rpsL | Ppb6_01413 | Ppb6_01417 | YheO-like PAS domain protein. | 30S ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. | 0.516 |
OCQ53396.1 | tusB | Ppb6_01413 | Ppb6_01416 | YheO-like PAS domain protein. | Protein TusB; Part of a sulfur-relay system required for 2-thiolation of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. | 0.769 |
OCQ53396.1 | tusD | Ppb6_01413 | Ppb6_01414 | YheO-like PAS domain protein. | Sulfurtransferase TusD; Part of a sulfur-relay system required for 2-thiolation of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE. | 0.823 |
dsrF | OCQ51368.1 | Ppb6_01415 | Ppb6_03440 | Intracellular sulfur oxidation protein DsrF; Part of a sulfur-relay system required for 2-thiolation of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. | Hypothetical protein. | 0.445 |
dsrF | OCQ53396.1 | Ppb6_01415 | Ppb6_01413 | Intracellular sulfur oxidation protein DsrF; Part of a sulfur-relay system required for 2-thiolation of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. | YheO-like PAS domain protein. | 0.825 |
dsrF | fkpA | Ppb6_01415 | Ppb6_01412 | Intracellular sulfur oxidation protein DsrF; Part of a sulfur-relay system required for 2-thiolation of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. | FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor. | 0.434 |
dsrF | rpsL | Ppb6_01415 | Ppb6_01417 | Intracellular sulfur oxidation protein DsrF; Part of a sulfur-relay system required for 2-thiolation of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. | 30S ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. | 0.516 |
dsrF | slyX | Ppb6_01415 | Ppb6_01411 | Intracellular sulfur oxidation protein DsrF; Part of a sulfur-relay system required for 2-thiolation of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. | Phi X174 lysis protein; Belongs to the SlyX family. | 0.428 |
dsrF | sprT | Ppb6_01415 | Ppb6_01540 | Intracellular sulfur oxidation protein DsrF; Part of a sulfur-relay system required for 2-thiolation of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. | Hypothetical protein; Belongs to the SprT family. | 0.463 |
dsrF | tusA | Ppb6_01415 | Ppb6_02523 | Intracellular sulfur oxidation protein DsrF; Part of a sulfur-relay system required for 2-thiolation of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. | Sulfurtransferase TusA; Sulfur carrier protein involved in sulfur trafficking in the cell. Part of a sulfur-relay system required for 2-thiolation during synthesis of 2-thiouridine of the modified wobble base 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) in tRNA. Interacts with IscS and stimulates its cysteine desulfurase activity. Accepts an activated sulfur from IscS, which is then transferred to TusD, and thus determines the direction of sulfur flow from IscS to 2-thiouridine formation. Also appears to be involved in sulfur transfer for the biosynthesis of molybdopterin. | 0.767 |
dsrF | tusB | Ppb6_01415 | Ppb6_01416 | Intracellular sulfur oxidation protein DsrF; Part of a sulfur-relay system required for 2-thiolation of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. | Protein TusB; Part of a sulfur-relay system required for 2-thiolation of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. | 0.998 |
dsrF | tusD | Ppb6_01415 | Ppb6_01414 | Intracellular sulfur oxidation protein DsrF; Part of a sulfur-relay system required for 2-thiolation of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. | Sulfurtransferase TusD; Part of a sulfur-relay system required for 2-thiolation of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE. | 0.999 |
dsrF | tusE | Ppb6_01415 | Ppb6_02723 | Intracellular sulfur oxidation protein DsrF; Part of a sulfur-relay system required for 2-thiolation of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. | Sulfurtransferase TusE; Part of a sulfur-relay system. | 0.933 |
fkpA | OCQ53396.1 | Ppb6_01412 | Ppb6_01413 | FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor. | YheO-like PAS domain protein. | 0.420 |
fkpA | dsrF | Ppb6_01412 | Ppb6_01415 | FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor. | Intracellular sulfur oxidation protein DsrF; Part of a sulfur-relay system required for 2-thiolation of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. | 0.434 |
fkpA | rpsL | Ppb6_01412 | Ppb6_01417 | FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor. | 30S ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. | 0.499 |