STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
craCatabolite repressor/activator. (335 aa)    
Predicted Functional Partners:
gltB
Glutamate synthase [NADPH] large chain precursor.
    
 
 0.877
grsB
Gramicidin S synthase 2.
    
 
 0.843
srfAA
Surfactin synthase subunit 1.
    
 
 0.839
ilvI
Acetolactate synthase isozyme 3 large subunit.
    
 0.829
ptsG_1
PTS system glucose-specific EIICBA component.
    
 0.789
bglF_1
PTS system beta-glucoside-specific EIIBCA component.
    
 0.789
murP
PTS system N-acetylmuramic acid-specific EIIBC component.
    
 0.683
treB
PTS system trehalose-specific EIIBC component.
    
 0.683
ptsG_2
PTS system glucose-specific EIICBA component.
    
 0.683
ilvH
Acetolactate synthase isozyme 3 small subunit.
       0.571
Your Current Organism:
Photorhabdus australis
NCBI taxonomy Id: 286156
Other names: ACM 5210, CIP 108025, DSM 17609, P. australis, Photorhabdus asymbiotica subsp. australis, Photorhabdus asymbiotica subsp. australis Akhurst et al. 2004, strain 9802892
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.