Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ggt | gor | Ppb6_01943 | Ppb6_00018 | Gamma-glutamyltranspeptidase precursor. | Glutathione reductase. | 0.716 |
ggt | gshB | Ppb6_01943 | Ppb6_03211 | Gamma-glutamyltranspeptidase precursor. | Glutathione synthetase; Belongs to the prokaryotic GSH synthase family. | 0.715 |
ggt | gstB_1 | Ppb6_01943 | Ppb6_01818 | Gamma-glutamyltranspeptidase precursor. | Glutathione S-transferase GST-6.0; Belongs to the GST superfamily. | 0.667 |
ggt | gstB_2 | Ppb6_01943 | Ppb6_03006 | Gamma-glutamyltranspeptidase precursor. | Glutathione S-transferase GstB; Belongs to the GST superfamily. | 0.662 |
ggt | sspA | Ppb6_01943 | Ppb6_02452 | Gamma-glutamyltranspeptidase precursor. | Stringent starvation protein A; Belongs to the GST superfamily. | 0.662 |
gor | ggt | Ppb6_00018 | Ppb6_01943 | Glutathione reductase. | Gamma-glutamyltranspeptidase precursor. | 0.716 |
gor | gshB | Ppb6_00018 | Ppb6_03211 | Glutathione reductase. | Glutathione synthetase; Belongs to the prokaryotic GSH synthase family. | 0.792 |
gor | gstB_1 | Ppb6_00018 | Ppb6_01818 | Glutathione reductase. | Glutathione S-transferase GST-6.0; Belongs to the GST superfamily. | 0.712 |
gor | gstB_2 | Ppb6_00018 | Ppb6_03006 | Glutathione reductase. | Glutathione S-transferase GstB; Belongs to the GST superfamily. | 0.690 |
gor | sspA | Ppb6_00018 | Ppb6_02452 | Glutathione reductase. | Stringent starvation protein A; Belongs to the GST superfamily. | 0.657 |
gshB | ggt | Ppb6_03211 | Ppb6_01943 | Glutathione synthetase; Belongs to the prokaryotic GSH synthase family. | Gamma-glutamyltranspeptidase precursor. | 0.715 |
gshB | gor | Ppb6_03211 | Ppb6_00018 | Glutathione synthetase; Belongs to the prokaryotic GSH synthase family. | Glutathione reductase. | 0.792 |
gshB | gstB_1 | Ppb6_03211 | Ppb6_01818 | Glutathione synthetase; Belongs to the prokaryotic GSH synthase family. | Glutathione S-transferase GST-6.0; Belongs to the GST superfamily. | 0.726 |
gshB | gstB_2 | Ppb6_03211 | Ppb6_03006 | Glutathione synthetase; Belongs to the prokaryotic GSH synthase family. | Glutathione S-transferase GstB; Belongs to the GST superfamily. | 0.706 |
gshB | sspA | Ppb6_03211 | Ppb6_02452 | Glutathione synthetase; Belongs to the prokaryotic GSH synthase family. | Stringent starvation protein A; Belongs to the GST superfamily. | 0.701 |
gstB_1 | ggt | Ppb6_01818 | Ppb6_01943 | Glutathione S-transferase GST-6.0; Belongs to the GST superfamily. | Gamma-glutamyltranspeptidase precursor. | 0.667 |
gstB_1 | gor | Ppb6_01818 | Ppb6_00018 | Glutathione S-transferase GST-6.0; Belongs to the GST superfamily. | Glutathione reductase. | 0.712 |
gstB_1 | gshB | Ppb6_01818 | Ppb6_03211 | Glutathione S-transferase GST-6.0; Belongs to the GST superfamily. | Glutathione synthetase; Belongs to the prokaryotic GSH synthase family. | 0.726 |
gstB_1 | gstB_2 | Ppb6_01818 | Ppb6_03006 | Glutathione S-transferase GST-6.0; Belongs to the GST superfamily. | Glutathione S-transferase GstB; Belongs to the GST superfamily. | 0.827 |
gstB_1 | metG | Ppb6_01818 | Ppb6_02986 | Glutathione S-transferase GST-6.0; Belongs to the GST superfamily. | Methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.555 |
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