Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OCQ52792.1 | arsC | Ppb6_02136 | Ppb6_02134 | Pheromone autoinducer 2 transporter. | Arsenate reductase. | 0.506 |
OCQ52792.1 | purB | Ppb6_02136 | Ppb6_02088 | Pheromone autoinducer 2 transporter. | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | 0.578 |
OCQ52792.1 | purE | Ppb6_02136 | Ppb6_03263 | Pheromone autoinducer 2 transporter. | N5-carboxyaminoimidazole ribonucleotide mutase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR). | 0.592 |
OCQ52792.1 | yfgC | Ppb6_02136 | Ppb6_02135 | Pheromone autoinducer 2 transporter. | TPR repeat-containing protein YfgC precursor; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state. | 0.506 |
arsC | OCQ52792.1 | Ppb6_02134 | Ppb6_02136 | Arsenate reductase. | Pheromone autoinducer 2 transporter. | 0.506 |
arsC | yfgC | Ppb6_02134 | Ppb6_02135 | Arsenate reductase. | TPR repeat-containing protein YfgC precursor; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state. | 0.836 |
purB | OCQ52792.1 | Ppb6_02088 | Ppb6_02136 | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | Pheromone autoinducer 2 transporter. | 0.578 |
purB | purE | Ppb6_02088 | Ppb6_03263 | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | N5-carboxyaminoimidazole ribonucleotide mutase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR). | 0.983 |
purE | OCQ52792.1 | Ppb6_03263 | Ppb6_02136 | N5-carboxyaminoimidazole ribonucleotide mutase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR). | Pheromone autoinducer 2 transporter. | 0.592 |
purE | purB | Ppb6_03263 | Ppb6_02088 | N5-carboxyaminoimidazole ribonucleotide mutase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR). | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | 0.983 |
yfgC | OCQ52792.1 | Ppb6_02135 | Ppb6_02136 | TPR repeat-containing protein YfgC precursor; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state. | Pheromone autoinducer 2 transporter. | 0.506 |
yfgC | arsC | Ppb6_02135 | Ppb6_02134 | TPR repeat-containing protein YfgC precursor; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state. | Arsenate reductase. | 0.836 |