STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
feaBPhenylacetaldehyde dehydrogenase. (497 aa)    
Predicted Functional Partners:
fmt
Methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
 
   
 0.877
tycC_1
Tyrocidine synthase 3; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 0.851
grsB
Gramicidin S synthase 2.
  
 0.831
gltB
Glutamate synthase [NADPH] large chain precursor.
  
 
 0.813
putA
Bifunctional protein PutA; Oxidizes proline to glutamate for use as a carbon and nitrogen source; Belongs to the aldehyde dehydrogenase family. In the N-terminal section; belongs to the proline dehydrogenase family.
 
0.792
maeB
NADP-dependent malic enzyme.
  
 
 0.774
OCQ53683.1
2-oxoisovalerate dehydrogenase subunit beta.
  
 
 0.769
OCQ53370.1
Putative FAD-linked oxidoreductase.
  
 
 0.766
kipA
KipI antagonist.
   
 
 0.760
OCQ54548.1
Phenylacetate-coenzyme A ligase.
   
 0.756
Your Current Organism:
Photorhabdus australis
NCBI taxonomy Id: 286156
Other names: ACM 5210, CIP 108025, DSM 17609, P. australis, Photorhabdus asymbiotica subsp. australis, Photorhabdus asymbiotica subsp. australis Akhurst et al. 2004, strain 9802892
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