STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAFP00020000047annotation not available (431 aa)    
Predicted Functional Partners:
U2AF2
U2 small nuclear RNA auxiliary factor 2.
    
 0.879
DDX46
DEAD-box helicase 46.
   
 0.848
PRPF39
pre-mRNA processing factor 39.
    
 0.846
SF3B2
Splicing factor 3b subunit 2.
   
 0.841
SF3B3
Splicing factor 3b subunit 3.
    
 0.838
RNF40
Ring finger protein 40.
   
 0.827
SF3A2
Splicing factor 3a subunit 2.
    
  0.827
ENSCAFP00020005560
annotation not available
   
 0.816
ENSCAFP00020005563
annotation not available
   
 0.816
RNF20
Ring finger protein 20.
   
 0.810
Your Current Organism:
Canis lupus dingo
NCBI taxonomy Id: 286419
Other names: C. lupus dingo, Canis familiaris dingo, dingo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.