Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FRG1FSHD region gene 1. (250 aa)    
Predicted Functional Partners:
CWC22
CWC22 spliceosome associated protein homolog.
   
   0.939
PRPF8
pre-mRNA processing factor 8.
    
 
 0.830
PRPF19
pre-mRNA processing factor 19.
    
   0.732
RBM8A
RNA binding motif protein 8A.
   
   0.729
PPIL1
Peptidylprolyl isomerase like 1.
    
   0.726
PLRG1
Pleiotropic regulator 1.
    
   0.725
CDC5L
Cell division cycle 5 like.
    
   0.720
SNRNP200
Small nuclear ribonucleoprotein U5 subunit 200.
    
   0.718
BCAS2
BCAS2 pre-mRNA processing factor.
   
 
 0.717
EFTUD2
Elongation factor Tu GTP binding domain containing 2.
    
   0.717
Your Current Organism:
Canis lupus dingo
NCBI taxonomy Id: 286419
Other names: C. lupus dingo, Canis familiaris dingo, dingo
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