STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GMCL1Germ cell-less 1, spermatogenesis associated. (532 aa)    
Predicted Functional Partners:
ZBTB25
Zinc finger and BTB domain containing 25.
      
 0.749
USHBP1
USH1 protein network component harmonin binding protein 1.
    
 
 0.742
CUL3
Cullin 3.
    
 0.717
KPNA6
Karyopherin subunit alpha 6.
    
 
 0.663
KPNA1
Karyopherin subunit alpha 1.
    
 
 0.646
SPATA6
Spermatogenesis associated 6.
      
 0.638
SPIN4
Spindlin family member 4.
      
 0.612
DDX39B
DExD-box helicase 39B.
      
 0.611
CUL1
Cullin 1.
    
 0.551
PRR14
Proline rich 14.
      
 0.537
Your Current Organism:
Canis lupus dingo
NCBI taxonomy Id: 286419
Other names: C. lupus dingo, Canis familiaris dingo, dingo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.