Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
VAX2Ventral anterior homeobox 2. (247 aa)    
Predicted Functional Partners:
VAX1
Ventral anterior homeobox 1.
   
 0.743
PHACTR4
Phosphatase and actin regulator 4.
      
 0.667
PAX2
Paired box 2.
     
 0.588
PAX5
Paired box 5.
     
 0.588
SIX6
SIX homeobox 6.
   
 
 0.582
SIX3
SIX homeobox 3.
   
 
 0.582
TBX5
T-box transcription factor 5.
     
 0.571
SCRT2
Scratch family transcriptional repressor 2.
      
 0.554
NACAD
NAC alpha domain containing.
      
 0.539
CHMP3
Charged multivesicular body protein 3.
    
   0.531
Your Current Organism:
Canis lupus dingo
NCBI taxonomy Id: 286419
Other names: C. lupus dingo, Canis familiaris dingo, dingo
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