Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
APOC3Apolipoprotein C3. (100 aa)    
Predicted Functional Partners:
APOA2
Apolipoprotein A2.
   
 0.997
APOC2
Apolipoprotein C2.
   
 
 0.996
APOB
Apolipoprotein B.
   
 
 0.989
APOA4
Apolipoprotein A4.
   
 
 0.987
APOC1
Apolipoprotein C1.
   
 
 0.975
APOE
Apolipoprotein E.
   
 
 0.965
APOH
Apolipoprotein H.
   
 
 0.948
APOA5
Apolipoprotein A5.
   
 
 0.935
LPL
Lipoprotein lipase.
    
 0.921
FABP1
Fatty acid binding protein 1.
   
 
 0.906
Your Current Organism:
Canis lupus dingo
NCBI taxonomy Id: 286419
Other names: C. lupus dingo, Canis familiaris dingo, dingo
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