Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LTBP2Latent transforming growth factor beta binding protein 2. (1799 aa)    
Predicted Functional Partners:
TGFB1
Transforming growth factor beta 1.
    
 0.927
TGFB3
Transforming growth factor beta 3.
   
 0.760
THBS1
Thrombospondin 1.
   
 
 0.760
TGFB2
Transforming growth factor beta 2.
    
 0.721
BGN
Biglycan.
   
 0.650
THBS2
Thrombospondin 2.
   
 
 0.647
COPZ2
Coatomer protein complex subunit zeta 2.
   
  
 0.643
CHD7
Chromodomain helicase DNA binding protein 7.
    
 0.637
FKBP10
FKBP prolyl isomerase 10.
   
 0.627
COL16A1
Collagen type XVI alpha 1 chain.
   
 0.610
Your Current Organism:
Canis lupus dingo
NCBI taxonomy Id: 286419
Other names: C. lupus dingo, Canis familiaris dingo, dingo
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