Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PDLIM5PDZ and LIM domain 5. (602 aa)    
Predicted Functional Partners:
LDB3
LIM domain binding 3.
     
 
0.935
PDLIM7
PDZ and LIM domain 7.
    
 
0.904
ENSCAFP00020031636
annotation not available
    
 
0.904
DYRK1A
Dual specificity tyrosine phosphorylation regulated kinase 1A.
   
 
 0.733
DBN1
Drebrin 1.
   
 
 0.690
PDLIM1
PDZ and LIM domain 1.
   
 
0.687
ENSCAFP00020022938
annotation not available
   
 
0.687
PDLIM3
PDZ and LIM domain 3.
   
 
0.676
SORBS2
Sorbin and SH3 domain containing 2.
   
 0.669
DOK3
Docking protein 3.
     
  0.665
Your Current Organism:
Canis lupus dingo
NCBI taxonomy Id: 286419
Other names: C. lupus dingo, Canis familiaris dingo, dingo
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