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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAFP00020004826annotation not available (189 aa)    
Predicted Functional Partners:
MTREX
Mtr4 exosome RNA helicase.
   
 0.746
REXO4
REX4 homolog, 3'-5' exonuclease.
   
   0.710
NOB1
NIN1 (RPN12) binding protein 1 homolog.
   
    0.653
IMP3
IMP U3 small nucleolar ribonucleoprotein 3.
   
 
 0.651
ENSCAFP00020008315
annotation not available
   
 
 0.651
LTV1
LTV1 ribosome biogenesis factor.
   
   0.646
BYSL
Bystin like.
   
   0.630
TENT4B
Terminal nucleotidyltransferase 4B.
   
 0.586
TENT4A
Terminal nucleotidyltransferase 4A.
   
 0.586
ZNHIT6
Zinc finger HIT-type containing 6.
   
   0.545
Your Current Organism:
Canis lupus dingo
NCBI taxonomy Id: 286419
Other names: C. lupus dingo, Canis familiaris dingo, dingo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.