ENSCAFP00020004885 protein (Canis lupus dingo)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

ENSCAFP00020004885

annotation not available (133 aa)

Predicted Functional Partners:

JCHAIN

0.647

ENSCAFP00020009524

0.556

ENSCAFP00020003213

0.553

ENSCAFP00020003341

0.552

ENSCAFP00020008390

0.547

ENSCAFP00020008410

0.546

ENSCAFP00020009578

0.544

ENSCAFP00020003242

0.543

ENSCAFP00020009548

0.543

ENSCAFP00020008382

0.541

Your Current Organism:

Canis lupus dingo

NCBI taxonomy Id: 286419
Other names: C. lupus dingo, Canis familiaris dingo, dingo

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCAFP00020003213	ENSCAFP00020004885	ENSCAFP00020003213	ENSCAFP00020004885	annotation not available	annotation not available	0.553
ENSCAFP00020003213	ENSCAFP00020009524	ENSCAFP00020003213	ENSCAFP00020009524	annotation not available	annotation not available	0.408
ENSCAFP00020003213	JCHAIN	ENSCAFP00020003213	ENSCAFP00020034941	annotation not available	Immunoglobulin J chain-like.	0.644
ENSCAFP00020003242	ENSCAFP00020004885	ENSCAFP00020003242	ENSCAFP00020004885	annotation not available	annotation not available	0.543
ENSCAFP00020003242	JCHAIN	ENSCAFP00020003242	ENSCAFP00020034941	annotation not available	Immunoglobulin J chain-like.	0.600
ENSCAFP00020003341	ENSCAFP00020004885	ENSCAFP00020003341	ENSCAFP00020004885	annotation not available	annotation not available	0.552
ENSCAFP00020003341	JCHAIN	ENSCAFP00020003341	ENSCAFP00020034941	annotation not available	Immunoglobulin J chain-like.	0.644
ENSCAFP00020004885	ENSCAFP00020003213	ENSCAFP00020004885	ENSCAFP00020003213	annotation not available	annotation not available	0.553
ENSCAFP00020004885	ENSCAFP00020003242	ENSCAFP00020004885	ENSCAFP00020003242	annotation not available	annotation not available	0.543
ENSCAFP00020004885	ENSCAFP00020003341	ENSCAFP00020004885	ENSCAFP00020003341	annotation not available	annotation not available	0.552
ENSCAFP00020004885	ENSCAFP00020008382	ENSCAFP00020004885	ENSCAFP00020008382	annotation not available	annotation not available	0.541
ENSCAFP00020004885	ENSCAFP00020008390	ENSCAFP00020004885	ENSCAFP00020008390	annotation not available	annotation not available	0.547
ENSCAFP00020004885	ENSCAFP00020008410	ENSCAFP00020004885	ENSCAFP00020008410	annotation not available	annotation not available	0.546
ENSCAFP00020004885	ENSCAFP00020009524	ENSCAFP00020004885	ENSCAFP00020009524	annotation not available	annotation not available	0.556
ENSCAFP00020004885	ENSCAFP00020009548	ENSCAFP00020004885	ENSCAFP00020009548	annotation not available	annotation not available	0.543
ENSCAFP00020004885	ENSCAFP00020009578	ENSCAFP00020004885	ENSCAFP00020009578	annotation not available	annotation not available	0.544
ENSCAFP00020004885	JCHAIN	ENSCAFP00020004885	ENSCAFP00020034941	annotation not available	Immunoglobulin J chain-like.	0.647
ENSCAFP00020008382	ENSCAFP00020004885	ENSCAFP00020008382	ENSCAFP00020004885	annotation not available	annotation not available	0.541
ENSCAFP00020008382	JCHAIN	ENSCAFP00020008382	ENSCAFP00020034941	annotation not available	Immunoglobulin J chain-like.	0.532
ENSCAFP00020008390	ENSCAFP00020004885	ENSCAFP00020008390	ENSCAFP00020004885	annotation not available	annotation not available	0.547