STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PODNL1Podocan like 1. (593 aa)    
Predicted Functional Partners:
LRR1
Leucine rich repeat protein 1.
  
   
 0.688
MRPL17
Mitochondrial ribosomal protein L17.
      
 0.637
NYX
Nyctalopin.
    
 0.576
ASAH1
N-acylsphingosine amidohydrolase 1.
   
  
 0.509
RAE1
Ribonucleic acid export 1.
      
 0.490
ADIG
Adipogenin.
      
 0.486
RAI2
Retinoic acid induced 2.
    
 0.478
WHRN
Whirlin.
    
 
 0.467
LOC112674186
Neuroendocrine secretory protein 55.
    
  0.465
GRIA4
Glutamate ionotropic receptor AMPA type subunit 4.
    
 0.454
Your Current Organism:
Canis lupus dingo
NCBI taxonomy Id: 286419
Other names: C. lupus dingo, Canis familiaris dingo, dingo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.