STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASCL3Achaete-scute family bHLH transcription factor 3. (180 aa)    
Predicted Functional Partners:
TRPM5
Transient receptor potential cation channel subfamily M member 5.
      
 0.767
CCDC153
Coiled-coil domain containing 153.
      
 0.757
CFTR
CF transmembrane conductance regulator.
      
 0.747
CCDC113
Coiled-coil domain containing 113.
      
 0.741
FOXI1
Forkhead box I1.
    
 
 0.628
TCF3
Transcription factor 3.
    
 0.617
LZTFL1
Leucine zipper transcription factor like 1.
      
 0.615
LYPD2
LY6/PLAUR domain containing 2.
      
 0.522
SC5D
sterol-C5-desaturase.
      
 0.511
ENSCAFP00020027064
annotation not available
    
 0.511
Your Current Organism:
Canis lupus dingo
NCBI taxonomy Id: 286419
Other names: C. lupus dingo, Canis familiaris dingo, dingo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.