STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TEFMTranscription elongation factor, mitochondrial. (360 aa)    
Predicted Functional Partners:
POLRMT
RNA polymerase mitochondrial.
    
 
 0.963
TFB2M
Transcription factor B2, mitochondrial.
   
  
 0.777
MTERF1
Mitochondrial transcription termination factor 1.
   
  
 0.766
VBP1
VHL binding protein 1.
   
    0.678
UTP6
UTP6 small subunit processome component.
 
    
 0.676
TRMT10C
tRNA methyltransferase 10C, mitochondrial RNase P subunit.
   
  
 0.665
CCDC58
Coiled-coil domain containing 58.
   
    0.655
PACRGL
Parkin coregulated like.
      
 0.637
MTERF2
Mitochondrial transcription termination factor 2.
   
  
 0.636
ADAP2
ArfGAP with dual PH domains 2.
      
 0.634
Your Current Organism:
Canis lupus dingo
NCBI taxonomy Id: 286419
Other names: C. lupus dingo, Canis familiaris dingo, dingo
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.