STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC116Coiled-coil domain containing 116. (525 aa)    
Predicted Functional Partners:
GNL1
G protein nucleolar 1 (putative).
    
   0.655
PRRG3
Proline rich and Gla domain 3.
      
 0.632
LRRC52
Leucine rich repeat containing 52.
      
 0.613
TCF23
Transcription factor 23.
   
  
 0.542
ACTL9
Actin like 9.
      
 0.540
CCDC38
Coiled-coil domain containing 38.
      
 0.538
CCDC96
Coiled-coil domain containing 96.
      
 0.536
ENSCAFP00020025811
annotation not available
      
 0.534
C8G
Complement C8 gamma chain.
      
 0.525
PKHD1L1
PKHD1 like 1.
      
 0.523
Your Current Organism:
Canis lupus dingo
NCBI taxonomy Id: 286419
Other names: C. lupus dingo, Canis familiaris dingo, dingo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.