STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OTUD6AOTU deubiquitinase 6A. (312 aa)    
Predicted Functional Partners:
EIF4G2
Eukaryotic translation initiation factor 4 gamma 2.
   
  0.730
VCPIP1
Valosin containing protein interacting protein 1.
      
 0.698
EIF4G1
Eukaryotic translation initiation factor 4 gamma 1.
   
  0.620
PAIP1
poly(A) binding protein interacting protein 1.
   
  0.620
OTUB2
OTU deubiquitinase, ubiquitin aldehyde binding 2.
    
 
 0.587
EIF4E
Eukaryotic translation initiation factor 4E.
   
  0.583
ENSCAFP00020007118
annotation not available
   
  0.583
EIF4G3
Eukaryotic translation initiation factor 4 gamma 3.
   
  0.562
OTUD3
OTU deubiquitinase 3.
   
  
0.540
OTUD5
OTU deubiquitinase 5.
      
0.536
Your Current Organism:
Canis lupus dingo
NCBI taxonomy Id: 286419
Other names: C. lupus dingo, Canis familiaris dingo, dingo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.