STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DHX38DEAH-box helicase 38. (1233 aa)    
Predicted Functional Partners:
CDC40
Cell division cycle 40.
   
 0.999
YJU2
YJU2 splicing factor homolog.
   
 0.997
CWC25
CWC25 spliceosome associated protein homolog.
    
 0.997
CWC22
CWC22 spliceosome associated protein homolog.
   
 0.996
SLU7
SLU7 homolog, splicing factor.
   
 0.995
CRNKL1
Crooked neck pre-mRNA splicing factor 1.
   
 0.992
PRPF8
pre-mRNA processing factor 8.
   
 0.991
XAB2
XPA binding protein 2.
   
 0.991
SRRM2
Serine/arginine repetitive matrix 2.
    
 0.991
CDC5L
Cell division cycle 5 like.
   
 0.990
Your Current Organism:
Canis lupus dingo
NCBI taxonomy Id: 286419
Other names: C. lupus dingo, Canis familiaris dingo, dingo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.