STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAFP00020032074annotation not available (276 aa)    
Predicted Functional Partners:
SYNCRIP
Synaptotagmin binding cytoplasmic RNA interacting protein.
   
 0.862
SNRNP48
Small nuclear ribonucleoprotein U11/U12 subunit 48.
     
 0.811
HNRNPU
Heterogeneous nuclear ribonucleoprotein U.
   
 0.796
DHX9
DExH-box helicase 9.
   
 0.771
STAU1
Staufen double-stranded RNA binding protein 1.
    
 0.714
LSM14A
LSM14A mRNA processing body assembly factor.
   
 0.703
CSDE1
Cold shock domain containing E1.
   
 0.660
STAU2
Staufen double-stranded RNA binding protein 2.
    
 0.635
SF3B2
Splicing factor 3b subunit 2.
    
 0.633
ENSCAFP00020007969
annotation not available
  
 0.631
Your Current Organism:
Canis lupus dingo
NCBI taxonomy Id: 286419
Other names: C. lupus dingo, Canis familiaris dingo, dingo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.