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rimO protein (Pseudomonas aeruginosa) - STRING interaction network
"rimO" - Ribosomal protein S12 methylthiotransferase RimO in Pseudomonas aeruginosa
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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rimORibosomal protein S12 methylthiotransferase RimO; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily (440 aa)    
Predicted Functional Partners:
ilvN
Acolac_sm- acetolactate synthase, small subunit (163 aa)
     
   
  0.881
rluA
annotation not available (211 aa)
   
 
  0.866
dusA
tRNA-dihydrouridine(20/20a) synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U20 and U20a in tRNAs; Belongs to the Dus family. DusA subfamily (312 aa)
 
   
  0.819
truB
tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs (304 aa)
   
   
  0.793
ttcA
tRNA-cytidine(32) 2-sulfurtransferase; Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine/cysteine desulfurase (IscS) system (274 aa)
 
   
  0.790
DR97_1022
annotation not available (182 aa)
            0.747
DR97_1025
Uncharacterized protein (153 aa)
   
        0.735
purC
purC- phosphoribosylaminoimidazolesuccinocarboxamide synthase; Belongs to the SAICAR synthetase family (236 aa)
         
  0.723
rimK
rimK_fam- alpha-L-glutamate ligases, RimK family protein; Belongs to the RimK family (301 aa)
       
 
  0.706
DR97_2597
MTHFS_bact- 5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family (203 aa)
         
  0.690
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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